Gene Information gene info

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GENE：USB1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol USB1
FullNmae U6 snRNA biogenesis phosphodiesterase 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:25792
EnsembleID ENSG00000103005
Uniprot Q9BQ65

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
USB1 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
USB1 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
USB1 GO:0000175,GO:0000175,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0008380,GO:0016829,GO:0034472,GO:0034477,GO:0034477,GO:0034477,GO:0045171,GO:1990838

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 USB1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 USB1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF USB1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 USB1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 USB1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A USB1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 USB1 N/A trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000003ABC4 USB1 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS0000235862 USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00006097A6 USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00002367FA USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000383DF4 USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000475586 USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00001310DE USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000081D1E USB1 23592263 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
BCAS2 USB1 25348397 N/A physical interaction ComPPI
SNW1 USB1 25348397 N/A physical interaction ComPPI
CDC5L USB1 25348397 N/A physical interaction ComPPI
SMAD4 USB1 14525934 15231748 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
WDR83 USB1 25348397 N/A physical interaction ComPPI
CSNK2A1 USB1 25348397 N/A physical interaction ComPPI
USB1 ELAVL1 25348397 N/A physical interaction ComPPI
USB1 PRPF19 25348397 N/A physical interaction ComPPI
USB1 PLRG1 25348397 N/A physical interaction ComPPI
USB1 CRNKL1 25348397 N/A physical interaction ComPPI
USB1 BUD31 25348397 N/A physical interaction ComPPI
USB1 AQR 25348397 N/A physical interaction ComPPI
USB1 RBM22 25348397 N/A physical interaction ComPPI
USB1 CWF19L2 25348397 N/A physical interaction ComPPI
USB1 ISY1 25348397 N/A physical interaction ComPPI
USB1 CDC40 25348397 N/A physical interaction ComPPI
USB1 SNX27 25348397 N/A physical interaction ComPPI
USB1 SNRNP200 25348397 N/A physical interaction ComPPI
XAB2 USB1 25348397 N/A physical interaction ComPPI

Source Target Pmid Interactiontype Methods Database
URS00008B3066 USB1 27087310 direct interaction,inhibition N/A NPInter

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