Gene Information gene info

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GENE：C9orf40

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol C9orf40
FullNmae chromosome 9 open reading frame 40
LocusType gene with protein product
Status Approved
HGNC_id HGNC:23433
EnsembleID ENSG00000135045
Uniprot Q8IXQ3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
C9orf40 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 C9ORF40 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 C9ORF40 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 C9ORF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000AA464 C9ORF40 20304954 25416803 mrna cleavage,inhibition array technology TarBase
URS00000600E6 C9ORF40 17242205 20371350 21572407 22473208 23446348 23622248 25416803 mrna cleavage,inhibition array technology,clip,clash TarBase
URS0000031E12 C9ORF40 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000042E1F C9ORF40 20371350 21572407 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000061E50F C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000B7E30 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000250A40 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000C48FA C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000508C13 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000041E949 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000027080C C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000346991 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000070CD2 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000025EABA C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000DDD35 C9ORF40 20371350 21572407 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000298BA3 C9ORF40 20371350 21572407 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002B3783 C9ORF40 20371350 21572407 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002075FA C9ORF40 20371350 21572407 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000039E1E1 C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000006F90B C9ORF40 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000010BD8D C9ORF40 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CDK2 C9ORF40 22135298 phosphorylation N/A PhosphoSite

Source Target Pmid Interactiontype Methods Database
XPO1 C9ORF40 25348397 N/A physical interaction ComPPI
TCEAL1 C9ORF40 25348397 N/A physical interaction ComPPI
SHMT2 C9ORF40 25348397 N/A physical interaction ComPPI
PLOD1 C9ORF40 25348397 N/A physical interaction ComPPI
NXF1 C9ORF40 25348397 N/A physical interaction ComPPI
MOV10 C9ORF40 25348397 N/A physical interaction ComPPI
DNAJB8 C9ORF40 25348397 N/A physical interaction ComPPI
MGRN1 C9ORF40 25348397 N/A physical interaction ComPPI
C9ORF40 PLPPR2 25348397 N/A physical interaction ComPPI

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