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GENE：RABGGTB

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RABGGTB
FullNmae Rab geranylgeranyltransferase subunit beta
LocusType gene with protein product
Status Approved
HGNC_id HGNC:9796
EnsembleID ENSG00000137955
Uniprot P53611

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RABGGTB pyroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RABGGTB autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RABGGTB GO:0004663,GO:0004663,GO:0005515,GO:0005829,GO:0005886,GO:0005968,GO:0005968,GO:0007601,GO:0008270,GO:0018344,GO:0018344,GO:0031267,GO:0036211

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 RABGGTB 20019798 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 RABGGTB 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXA1 RABGGTB 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000122ED0 RABGGTB 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS00002971AB RABGGTB 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000AA464 RABGGTB 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
RABGGTB RAB27A 25361965 interaction type N/A PTMCode2
RAB27A RABGGTB 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
RHOBTB3 RABGGTB 25348397 N/A physical interaction ComPPI
SH3GLB1 RABGGTB 23414517 24234451 25348397 physical association two hybrid fragment pooling approach ComPPI,IntAct
RAB3A RABGGTB 12535645 14525934 25348397 27898060 7991565 8706741 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD,OmniPath
PPP1R16A RABGGTB 25348397 N/A physical interaction ComPPI
RABGGTB TAFA1 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RABGGTB B4GALT7 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RABGGTB RAB1A 14525934 25348397 7991565 N/A experimental interaction detection,in vitro ComPPI,HPRD
RABGGTB ARAF 12620389 14525934 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
RABGGTB PTP4A2 11447212 25348397 26186194 27898060 N/A two hybrid,physical interaction,in vitro,in vivo ComPPI,OmniPath
RABGGTB CHML 12535645 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
RABGGTB RAB6A 14525934 25348397 8175798 N/A experimental interaction detection,in vitro ComPPI,HPRD
RABGGTB RAB11A 14525934 25348397 9719562 N/A experimental interaction detection,in vivo ComPPI,HPRD
RABGGTB RAB27A 12802062 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
RABGGTB RAB5A 14525934 24234451 25348397 29568061 7991565 association experimental interaction detection,pull down,physical interaction,in vitro,proximity-dependent biotin identification ComPPI,HPRD,IntAct
RABGGTB RAB7A 11591706 14525934 25348397 27898060 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
RABGGTB ALAS2 14525934 25348397 27898060 546546 N/A experimental interaction detection,in vivo ComPPI,HPRD,OmniPath
RABGGTB FBXL2 25348397 N/A physical interaction ComPPI
RABGGTB WDR4 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RABGGTB TMEM25 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RABGGTB RAB37 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RABGGTB RAB17 25348397 N/A physical interaction ComPPI
RABGGTB RAB40B 25348397 N/A physical interaction ComPPI
RABGGTB INPP5A 25348397 N/A physical interaction ComPPI
RABGGTB PRRC2C 25348397 N/A physical interaction ComPPI
RABGGTB PIP5K1C 25348397 N/A physical interaction ComPPI
RABGGTB PIP5K1A 25348397 N/A physical interaction ComPPI
RABGGTB AKAP11 25348397 N/A physical interaction ComPPI
RABGGTB PALM 25348397 N/A physical interaction ComPPI
RABGGTB NOTCH3 25348397 N/A physical interaction ComPPI
RABGGTB NOTCH2 25348397 N/A physical interaction ComPPI
RABGGTB MAGED4 25348397 N/A physical interaction ComPPI
RABGGTB MCMBP 25348397 N/A physical interaction ComPPI
RABGGTB BORA 25348397 N/A physical interaction ComPPI
RABGGTB ABRAXAS1 25348397 N/A physical interaction ComPPI
RABGGTB CALCOCO1 25348397 N/A physical interaction ComPPI
RABGGTB TRIM33 25348397 N/A physical interaction ComPPI
RABGGTB PTAR1 25348397 N/A physical interaction ComPPI
RABGGTB RRAS2 25348397 N/A physical interaction ComPPI
RABGGTB HRAS 25348397 N/A physical interaction ComPPI
RABGGTB NRAS 25348397 N/A physical interaction ComPPI
RABGGTB PXN 25348397 N/A physical interaction ComPPI
RABGGTB RAB40C 25348397 N/A physical interaction ComPPI
RABGGTB RAP2A 25348397 N/A physical interaction ComPPI
RABGGTB RABGGTA 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RABGGTB ARHGEF6 25348397 N/A physical interaction ComPPI
RABGGTB ACOT9 25348397 N/A physical interaction ComPPI
RABGGTB PTP4A1 25348397 N/A physical interaction ComPPI
RABGGTB PRKACB 25348397 N/A physical interaction ComPPI
RABGGTB MCM5 25348397 N/A physical interaction ComPPI
RABGGTB FAM219A 25348397 N/A physical interaction ComPPI
RABGGTB PRKAR1B 25348397 N/A physical interaction ComPPI
RABGGTB AP5Z1 25348397 N/A physical interaction ComPPI
RABGGTB FOXK1 25348397 N/A physical interaction ComPPI
RABGGTB NCOA1 25348397 N/A physical interaction ComPPI
RABGGTB GNB1L 25348397 N/A physical interaction ComPPI
RABGGTB HOOK1 25348397 N/A physical interaction ComPPI
RABGGTB GIT1 25348397 N/A physical interaction ComPPI
RABGGTB GIT2 25348397 N/A physical interaction ComPPI
RABGGTB ZC3HAV1L 25348397 N/A physical interaction ComPPI
RABGGTB PGBD5 25348397 N/A physical interaction ComPPI
RABGGTB TRMT2B 25348397 N/A physical interaction ComPPI
RABGGTB YKT6 25348397 N/A physical interaction ComPPI
RABGGTB PSKH2 25348397 N/A physical interaction ComPPI
RABGGTB RAB31 25348397 N/A physical interaction ComPPI
RABGGTB RAB9B 25348397 N/A physical interaction ComPPI
RABGGTB FBXL20 25348397 N/A physical interaction ComPPI
RABGGTB RAB7B 25348397 N/A physical interaction ComPPI
RABGGTB RAB6B 25348397 N/A physical interaction ComPPI
RABGGTB RAP2C 25348397 N/A physical interaction ComPPI
RABGGTB RAB9A 25348397 N/A physical interaction ComPPI
RABGGTB MCM3 25348397 N/A physical interaction ComPPI
RABGGTB RAB8A 24234451 25348397 26824392 association anti tag coimmunoprecipitation ComPPI,IntAct
RABGGTB IGFBP6 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RABGGTB KSR2 24234451 25348397 27086506 association anti tag coimmunoprecipitation ComPPI,IntAct
RABGGTB RABGGTB 11447212 14525934 N/A experimental interaction detection,two hybrid HPRD
NPSR1 RABGGTB 24234451 28298427 physical association ubiquitin reconstruction IntAct
RABGGTB RAB11A 27898060 9719562 N/A N/A OmniPath

Source Target Pmid Interactiontype Methods Database
URS00008BB85C RABGGTB 27087310 direct interaction,inhibition N/A NPInter

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