GeneInfo:
| GeneAttribute |
GeneDescription |
| GeneSymbol |
RTL6 |
| FullNmae |
retrotransposon Gag like 6 |
| LocusType |
gene with protein product |
| Status |
Approved |
| HGNC_id |
HGNC:13343 |
| EnsembleID |
ENSG00000188636 |
| Uniprot |
Q6ICC9 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
| RTL6 |
autosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| SMARCA4 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| CTCF |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| E2F1 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| EGR1 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| FOXA1 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| RUNX1 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| TRIM28 |
RTL6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| URS00000EC1BE |
RTL6 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
| URS000007F792 |
RTL6 |
24374217
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS000076B539 |
RTL6 |
20371350
21572407
23446348
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000076995 |
RTL6 |
20371350
21572407
23446348
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000272A3D |
RTL6 |
20371350
21572407
23446348
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS000039607D |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS000006372A |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS000045B99E |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS000041E949 |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000346991 |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000210075 |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS00001938D9 |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000427B68 |
RTL6 |
20371350
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| MAFF |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| GOPC |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TERF2 |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| DDIT3 |
RTL6 |
20562859
24234451
25348397
|
physical association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
| STX18 |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| BATF3 |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| NXF1 |
RTL6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SHARPIN |
RTL6 |
24234451
30561431
|
association |
virotrap |
IntAct |
Visualization
