Gene Information gene info

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GENE：SEC24D

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SEC24D
FullNmae SEC24 homolog D, COPII coat complex component
LocusType gene with protein product
Status Approved
HGNC_id HGNC:10706
EnsembleID ENSG00000150961
Uniprot O94855

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SEC24D immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SEC24D autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SEC24D GO:0000149,GO:0000149,GO:0001701,GO:0005515,GO:0005789,GO:0005829,GO:0006886,GO:0006888,GO:0006888,GO:0008270,GO:0008270,GO:0012507,GO:0030127,GO:0030127,GO:0030127,GO:0043231,GO:0070971,GO:0090110,GO:0090110

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SEC24D hsa:9871 path:hsa04141 Protein processing in endoplasmic reticulum - Homo sapiens (human)
SEC24D hsa:9871 path:hsa05130 Pathogenic Escherichia coli infection - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR SEC24D 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SEC24D 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 SEC24D 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 SEC24D 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
TFAP2C SEC24D 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 SEC24D 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 SEC24D 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000075ABF4 SEC24D 19336450 rna interference,inhibition western blot,quantitative reverse transcription pcr miRSponge
URS000075ABF4 SEC24D 19336450 25416803 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr TarBase
URS0000237AF9 SEC24D 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS00000F31F4 SEC24D 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS00000B59A2 SEC24D 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS000028DE3F SEC24D 23824327 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00000451A1 SEC24D 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001AFC71 SEC24D 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075C1E1 SEC24D 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075D2F5 SEC24D 23824327 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
LMO4 SEC24D 14525934 15231748 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
SEC23B SEC24D 14525934 16189514 21516116 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
SH3KBP1 SEC24D 25348397 N/A physical interaction ComPPI
TMA16 SEC24D 25348397 N/A physical interaction ComPPI
SF3B4 SEC24D 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
CD2AP SEC24D 25348397 N/A physical interaction ComPPI
ARFIP1 SEC24D 25348397 N/A physical interaction ComPPI
NTRK1 SEC24D 25348397 N/A physical interaction ComPPI
WWP2 SEC24D 21516116 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PXN SEC24D 25348397 N/A physical interaction ComPPI
EWSR1 SEC24D 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
XPO1 SEC24D 25348397 N/A physical interaction ComPPI
GTF2E2 SEC24D 25348397 N/A physical interaction ComPPI
CDK16 SEC24D 16091426 24234451 25348397 physical association two hybrid ComPPI,IntAct
ERN1 SEC24D 24234451 25348397 25742138 association anti bait coimmunoprecipitation ComPPI,IntAct
H1-2 SEC24D 25348397 N/A physical interaction ComPPI
VPS29 SEC24D 25348397 N/A physical interaction ComPPI
PLEKHO1 SEC24D 25348397 N/A physical interaction ComPPI
SHMT2 SEC24D 25348397 N/A physical interaction ComPPI
RSU1 SEC24D 25348397 N/A physical interaction ComPPI
SEC24A SEC24D 25348397 N/A physical interaction ComPPI
SEC24D TMED2 20427317 24234451 25348397 physical association anti tag coimmunoprecipitation ComPPI,IntAct
SEC24D SEC23IP 10097109 10330397 10720463 10749860 10753972 11535824 12239560 12408798 12671686 12778054 21532587 24947508 27898060 8930902 N/A N/A OmniPath

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