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GENE：SMARCD2

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SMARCD2
FullNmae SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11107
EnsembleID ENSG00000108604
Uniprot Q92925

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SMARCD2 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SMARCD2 GO:0000776,GO:0000785,GO:0000785,GO:0003712,GO:0003713,GO:0005515,GO:0005634,GO:0005654,GO:0006337,GO:0006338,GO:0006338,GO:0006338,GO:0006357,GO:0006357,GO:0016363,GO:0016514,GO:0016514,GO:0016514,GO:0016586,GO:0030071,GO:0031492,GO:0032991,GO:0035060,GO:0045582,GO:0045597,GO:0045663,GO:0045893,GO:0070316,GO:0140092,GO:2000045,GO:2000781,GO:2000819

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SMARCD2 hsa:6603 path:hsa03082 ATP-dependent chromatin remodeling - Homo sapiens (human)
SMARCD2 hsa:6603 path:hsa04714 Thermogenesis - Homo sapiens (human)
SMARCD2 hsa:6603 path:hsa05225 Hepatocellular carcinoma - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
RNF2 SMARCD2 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 SMARCD2 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 SMARCD2 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 SMARCD2 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
TFAP2C SMARCD2 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 SMARCD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000338542 SMARCD2 18668040 25416803 mrna cleavage,inhibition experimental interaction detection TarBase
URS00000BE495 SMARCD2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000005481D SMARCD2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000008A99 SMARCD2 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SMARCD2 ACTL6A 25361965 interaction type N/A PTMCode2
ACTL6A SMARCD2 25361965 interaction type N/A PTMCode2
SMARCA4 SMARCD2 25361965 interaction type N/A PTMCode2
SMARCD2 SMARCA4 25361965 interaction type N/A PTMCode2
SMARCA2 SMARCD2 25361965 interaction type N/A PTMCode2
SMARCD2 SMARCA2 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
SMARCE1 SMARCD2 25348397 N/A physical interaction ComPPI
SMARCC1 SMARCD2 25348397 N/A physical interaction ComPPI
KPNA1 SMARCD2 25348397 N/A physical interaction ComPPI
QPRT SMARCD2 25348397 N/A physical interaction ComPPI
BMI1 SMARCD2 25348397 N/A physical interaction ComPPI
NFATC1 SMARCD2 25348397 N/A physical interaction ComPPI
GRB2 SMARCD2 17474147 24234451 25348397 physical association peptide array ComPPI,IntAct
JUN SMARCD2 24234451 25348397 25609649 association anti bait coimmunoprecipitation ComPPI,IntAct
SMARCD1 SMARCD2 25348397 N/A physical interaction ComPPI
CUL3 SMARCD2 25348397 N/A physical interaction ComPPI
NTRK1 SMARCD2 25348397 N/A physical interaction ComPPI
PTPN1 SMARCD2 25348397 N/A physical interaction ComPPI
SMARCA4 SMARCD2 12368262 24234451 25348397 association coimmunoprecipitation,physical interaction ComPPI,IntAct
CACYBP SMARCD2 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
ARID1B SMARCD2 25348397 N/A physical interaction ComPPI
TP73 SMARCD2 25348397 N/A physical interaction ComPPI
NFATC2 SMARCD2 25348397 N/A physical interaction ComPPI
RBBP5 SMARCD2 25348397 N/A physical interaction ComPPI
SMARCB1 SMARCD2 24234451 25348397 30108113 association pull down,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
UPF2 SMARCD2 25348397 N/A physical interaction ComPPI
RNF2 SMARCD2 25348397 N/A physical interaction ComPPI
ACTL6A SMARCD2 11780067 24234451 25348397 physical association physical interaction,ion exchange chromatography ComPPI,IntAct
TP63 SMARCD2 25348397 N/A physical interaction ComPPI
SIRT1 SMARCD2 25348397 N/A physical interaction ComPPI
MDC1 SMARCD2 25348397 N/A physical interaction ComPPI
PSMD2 SMARCD2 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
BAZ1B SMARCD2 25348397 N/A physical interaction ComPPI
TBL1X SMARCD2 25348397 N/A physical interaction ComPPI
XRN1 SMARCD2 14525934 15231747 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
NUP153 SMARCD2 25348397 N/A physical interaction ComPPI
SS18 SMARCD2 25348397 N/A physical interaction ComPPI
TRIM25 SMARCD2 25348397 N/A physical interaction ComPPI
NUP50 SMARCD2 25348397 N/A physical interaction ComPPI
TBL1XR1 SMARCD2 25348397 N/A physical interaction ComPPI
BPTF SMARCD2 25348397 N/A physical interaction ComPPI
BRCA1 SMARCD2 25348397 N/A physical interaction ComPPI
STUB1 SMARCD2 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
SMARCD3 SMARCD2 18765789 24234451 25348397 association tandem affinity purification ComPPI,IntAct
SMARCC2 SMARCD2 25348397 N/A physical interaction ComPPI
SMARCD2 TP53 25348397 N/A physical interaction ComPPI
SMARCD2 SMARCA2 25348397 N/A physical interaction ComPPI
SMARCD2 UNKL 20148946 24234451 25348397 physical association two hybrid,pull down,physical interaction ComPPI,IntAct
SMARCD2 SMARCAD1 25348397 N/A physical interaction ComPPI
SMARCD2 ARID1A 24234451 25348397 30021884 physical association cross-linking study,physical interaction ComPPI,IntAct
SMARCD2 TOP2B 25348397 N/A physical interaction ComPPI
SMARCD2 KYNU 25348397 N/A physical interaction ComPPI
SMARCD2 NUDCD2 25348397 N/A physical interaction ComPPI
SMARCD2 NOTCH2NLA 25348397 N/A physical interaction ComPPI
SMARCD2 DPF3 25348397 N/A physical interaction ComPPI
SMARCD2 DPF2 25348397 N/A physical interaction ComPPI
SMARCD2 BCL7A 25348397 N/A physical interaction ComPPI
SMARCD2 BCL7B 25348397 N/A physical interaction ComPPI
SMARCD2 BCL7C 25348397 N/A physical interaction ComPPI
SMARCD2 PCM1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SMARCD2 SAMHD1 25348397 N/A physical interaction ComPPI
SMARCD2 RELB 14743216 24234451 25348397 physical association physical interaction,tandem affinity purification ComPPI,IntAct
SMARCD2 FANCA 25348397 N/A physical interaction ComPPI
SMARCD2 CHD7 20130577 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
SMARCD2 FKBP5 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
SMARCD2 MLF1 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
SMARCD2 BAG2 24234451 25036637 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
SMARCD2 JMJD6 24234451 24498420 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
TEX13A SMARCD2 25348397 N/A physical interaction ComPPI
MKI67 SMARCD2 24234451 26949251 association anti tag coimmunoprecipitation IntAct

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