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GENE：RAB1B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RAB1B
FullNmae RAB1B, member RAS oncogene family
LocusType gene with protein product
Status Approved
HGNC_id HGNC:18370
EnsembleID ENSG00000174903
Uniprot Q9H0U4

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RAB1B pyroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RAB1B autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RAB1B GO:0000045,GO:0000139,GO:0003924,GO:0003925,GO:0005515,GO:0005525,GO:0005789,GO:0005794,GO:0005829,GO:0006886,GO:0006888,GO:0007030,GO:0012505,GO:0019068,GO:0030133,GO:0033116,GO:0034045,GO:0048471,GO:0070062,GO:1903020,GO:2000785

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
RAB1B hsa:81876 path:hsa05134 Legionellosis - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
MAVS RAB1B 23180781 25734423 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 RAB1B 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
E2F4 RAB1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RAB1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 RAB1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000544FF1 RAB1B 22580605 22743998 25416803 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay miRDeathDB,TarBase
URS000008F0CF RAB1B 19688090 25416803 26701625 mrna cleavage,inhibition array technology,experimental interaction detection,quantitative reverse transcription pcr,clip TarBase
URS00002C0FCB RAB1B 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00003BBF48 RAB1B 20371350 25416803 26701625 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS0000070B1D RAB1B 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000036AFF1 RAB1B 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000005481D RAB1B 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00002367FA RAB1B 23622248 25416803 26701625 mrna cleavage,inhibition clip,clash TarBase
URS000041CB9C RAB1B 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000060AABB RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000521626 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001C770D RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000000C73C RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004F2EB0 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000160683 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002152A8 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000022AAA RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000001EB3 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075A760 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00006097A6 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000475586 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005F9738 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000C48FA RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004214BB RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000209F04 RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005194EC RAB1B 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
GOLGA2 RAB1B 11306556 14525934 15796781 24234451 25348397 27898060 physical association two hybrid,experimental interaction detection,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,in vitro,two hybrid ComPPI,HPRD,IntAct,OmniPath
CDC73 RAB1B 25348397 N/A physical interaction ComPPI
CDC42 RAB1B 25348397 N/A physical interaction ComPPI
RPN1 RAB1B 25348397 N/A physical interaction ComPPI
STX12 RAB1B 25348397 N/A physical interaction ComPPI
BAG3 RAB1B 25348397 N/A physical interaction ComPPI
LDHB RAB1B 25348397 N/A physical interaction ComPPI
LDHA RAB1B 25348397 N/A physical interaction ComPPI
RABIF RAB1B 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TOMM22 RAB1B 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
LSM2 RAB1B 25348397 N/A physical interaction ComPPI
FASTKD3 RAB1B 20869947 24234451 25348397 association tandem affinity purification ComPPI,IntAct
UBL4A RAB1B 25348397 N/A physical interaction ComPPI
GDI2 RAB1B 25348397 N/A physical interaction ComPPI
RAB8A RAB1B 25348397 N/A physical interaction ComPPI
RAP1GDS1 RAB1B 25348397 N/A physical interaction ComPPI
VAPA RAB1B 25348397 N/A physical interaction ComPPI
DUT RAB1B 25348397 N/A physical interaction ComPPI
RAB7A RAB1B 25348397 N/A physical interaction ComPPI
RNH1 RAB1B 25348397 N/A physical interaction ComPPI
CANX RAB1B 25348397 N/A physical interaction ComPPI
PHB RAB1B 25348397 N/A physical interaction ComPPI
PSMA1 RAB1B 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
DNAJA3 RAB1B 25348397 N/A physical interaction ComPPI
PDHA1 RAB1B 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
RAB1A RAB1B 25348397 N/A physical interaction ComPPI
CHM RAB1B 14525934 25348397 26186194 27898060 9437002 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,OmniPath
RABGGTA RAB1B 25348397 N/A physical interaction ComPPI
RAB2A RAB1B 25348397 N/A physical interaction ComPPI
RAB5A RAB1B 25348397 N/A physical interaction ComPPI
GDI1 RAB1B 14525934 25348397 26186194 27898060 8836150 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,OmniPath
RAB6A RAB1B 25348397 N/A physical interaction ComPPI
RAB5B RAB1B 25348397 N/A physical interaction ComPPI
RAB8B RAB1B 25348397 N/A physical interaction ComPPI
ATP1A1 RAB1B 25348397 N/A physical interaction ComPPI
ATP1B1 RAB1B 25348397 N/A physical interaction ComPPI
RAB11A RAB1B 25348397 N/A physical interaction ComPPI
VHL RAB1B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
OCRL RAB1B 21378754 24234451 25107275 25348397 association anti tag coimmunoprecipitation,fluorescence polarization spectroscopy,molecular sieving ComPPI,IntAct
ACTL6A RAB1B 25348397 N/A physical interaction ComPPI
UQCRC2 RAB1B 25348397 N/A physical interaction ComPPI
EED RAB1B 25348397 N/A physical interaction ComPPI
MICAL1 RAB1B 14525934 15796781 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
STX7 RAB1B 25348397 N/A physical interaction ComPPI
RAB9A RAB1B 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
RAB1B RUSC2 14525934 15796781 24234451 25348397 physical association two hybrid,experimental interaction detection,pull down,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,in vitro,two hybrid ComPPI,HPRD,IntAct
RAB1B MICAL3 25348397 N/A two hybrid,in vitro ComPPI
RAB1B APP 25348397 N/A physical interaction ComPPI
RAB1B RAB11B 25348397 N/A physical interaction ComPPI
RAB1B SMARCC2 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RAB1B TOMM40L 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RAB1B HSPD1 25348397 N/A physical interaction ComPPI
RAB1B CHML 25348397 N/A physical interaction ComPPI
RAB1B BZW2 25348397 N/A physical interaction ComPPI
RAB1B RAB33B 25348397 N/A physical interaction ComPPI
RAB1B RNF26 25348397 N/A physical interaction ComPPI
RAB1B ATP1A3 25348397 N/A physical interaction ComPPI
RAB1B CCDC47 25348397 N/A physical interaction ComPPI
RAB1B CYC1 25348397 N/A physical interaction ComPPI
RAB1B DHRS7B 25348397 N/A physical interaction ComPPI
RAB1B ETFA 25348397 N/A physical interaction ComPPI
RAB1B KDSR 25348397 N/A physical interaction ComPPI
RAB1B LDHC 25348397 N/A physical interaction ComPPI
RAB1B MT-CO2 25348397 N/A physical interaction ComPPI
RAB1B PDCD6 25348397 N/A physical interaction ComPPI
RAB1B AHSA1 25348397 N/A physical interaction ComPPI
RAB1B ARF1 25348397 N/A physical interaction ComPPI
RAB1B ATP1B3 25348397 N/A physical interaction ComPPI
RAB1B HSD17B12 25348397 N/A physical interaction ComPPI
RAB1B NDUFS8 25348397 N/A physical interaction ComPPI
RAB1B PLIN3 25348397 N/A physical interaction ComPPI
RAB1B RAB5C 25348397 N/A physical interaction ComPPI
RAB1B RAP2C 25348397 N/A physical interaction ComPPI
RAB1B SSRP1 25348397 N/A physical interaction ComPPI
RAB1B TECR 25348397 N/A physical interaction ComPPI
RAB1B TMCO1 25348397 N/A physical interaction ComPPI
RAB1B TOMM40 25348397 N/A physical interaction ComPPI
RAB1B UQCRQ 25348397 N/A physical interaction ComPPI
RAB1B RAB6B 25348397 N/A physical interaction ComPPI
RAB1B RDH13 25348397 N/A physical interaction ComPPI
RAB1B RPN2 25348397 N/A physical interaction ComPPI
RAB1B TMED2 25348397 N/A physical interaction ComPPI
RAB1B RAB2B 25348397 N/A physical interaction ComPPI
RAB1B DLST 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
RAB1B MCC 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
RAB1B HLA-B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
RAB1B LRRK2 24234451 25348397 26824392 phosphorylation reaction protein kinase assay ComPPI,IntAct
MICALCL RAB1B 14525934 15694364 N/A experimental interaction detection,two hybrid HPRD

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