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GENE：TRIM65

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TRIM65
FullNmae tripartite motif containing 65
LocusType gene with protein product
Status Approved
HGNC_id HGNC:27316
EnsembleID ENSG00000141569
Uniprot Q6PJ69

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TRIM65 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
TRIM65 autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
TRIM65 GO:0001934,GO:0005654,GO:0005737,GO:0005829,GO:0008270,GO:0010508,GO:0010508,GO:0016567,GO:0032461,GO:0032727,GO:0032728,GO:0050728,GO:0060337,GO:0061630,GO:0140374

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
SRPK1 TRIM65 23180781 23602568 phosphorylation reaction protein kinase assay InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 TRIM65 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 TRIM65 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA TRIM65 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF TRIM65 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 TRIM65 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A TRIM65 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003380CC TRIM65 17612493 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 TRIM65 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00005651EE TRIM65 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000005481D TRIM65 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001597DC TRIM65 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000DDD35 TRIM65 23622248 25416803 27292025 mrna cleavage,inhibition clip,clash TarBase
URS0000355E82 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075A760 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004D84DB TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001C770D TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000006372A TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000052EA98 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000EEE35 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004CCA62 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000183BED TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001CC864 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000411752 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000753AD TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000011DF TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000041E780 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000013ABA3 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003FBC84 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000043C1C3 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000486E0B TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000047A67D TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000451A1 TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003E226A TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00005D12AC TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000038446A TRIM65 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000039E1E1 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000600E6 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000016FD1A TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00002075FA TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000021D7C8 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000042E1F TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00002B3783 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000070CD2 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000346991 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000027080C TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000041E949 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000508C13 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000298BA3 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000021D08 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000075AB14 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000075D814 TRIM65 25416803 27292025 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
MKRN3 TRIM65 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RHOA TRIM65 24234451 25348397 27829229 physical association coimmunoprecipitation ComPPI,IntAct
AXIN1 TRIM65 25348397 N/A physical interaction ComPPI
SRPK1 TRIM65 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
ALOX5 TRIM65 25348397 N/A physical interaction ComPPI
ELAVL1 TRIM65 25348397 N/A physical interaction ComPPI
TES TRIM65 25348397 N/A physical interaction ComPPI
P4HA2 TRIM65 25348397 N/A physical interaction ComPPI
ANAPC11 TRIM65 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
UBE2Z TRIM65 19549727 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
RBCK1 TRIM65 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
MARCHF7 TRIM65 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
GATD1 TRIM65 25348397 N/A physical interaction ComPPI
TNRC6B TRIM65 25348397 N/A physical interaction ComPPI
TP53 TRIM65 25348397 N/A physical interaction ComPPI
UBE3A TRIM65 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
TNRC6A TRIM65 25348397 N/A physical interaction ComPPI
UBE2U TRIM65 19690564 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TRIM65 ALDH3B1 25348397 N/A physical interaction ComPPI
TRIM65 ARHGAP25 25348397 N/A physical interaction ComPPI
TRIM65 CCNJL 25348397 N/A physical interaction ComPPI
TRIM65 CRYL1 25348397 N/A physical interaction ComPPI
TRIM65 SNX21 25348397 N/A physical interaction ComPPI
TRIM65 DOCK5 25348397 N/A physical interaction ComPPI

Visualization










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