Gene Information gene info

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GENE：IFT88

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol IFT88
FullNmae intraflagellar transport 88
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20606
EnsembleID ENSG00000032742
Uniprot Q13099

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
IFT88 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
IFT88 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
IFT88 GO:0001822,GO:0005515,GO:0005813,GO:0005814,GO:0005814,GO:0005814,GO:0005829,GO:0005929,GO:0005929,GO:0005929,GO:0005929,GO:0019894,GO:0030992,GO:0030992,GO:0031514,GO:0034021,GO:0035720,GO:0036064,GO:0036064,GO:0036064,GO:0036126,GO:0042073,GO:0045724,GO:0060122,GO:0060271,GO:0060271,GO:0097542,GO:0097546,GO:0097730,GO:1902017,GO:1905515,GO:2000785

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 IFT88 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 IFT88 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
PRDM14 IFT88 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF IFT88 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
SMARCE1 IFT88 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CIAO1 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
TUBB IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
CASP14 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
VCP IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
HSP90AA1 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
ENO1 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
HSPA5 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
HSPA1A IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
PRMT5 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
PRRC2A IFT88 14525934 14667819 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
CILK1 IFT88 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CSNK2A2 IFT88 25348397 N/A physical interaction ComPPI
SMNDC1 IFT88 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
WDR77 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
PHB2 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
AZGP1 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
SERPINB12 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
PPM1B IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
CDKN2AIP IFT88 25348397 N/A physical interaction ComPPI
EIF4B IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
IFT57 IFT88 24234451 25348397 27173435 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
TRAF3IP1 IFT88 24234451 25348397 27173435 association,physical association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
EEF2 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
IFT20 IFT88 17312020 19253336 24234451 25348397 27173435 27898060 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct,OmniPath
ZWINT IFT88 25348397 N/A physical interaction ComPPI
HSPD1 IFT88 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
CLUAP1 IFT88 24234451 25348397 27173435 association,physical association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RPGR IFT88 14525934 16043481 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
IFT88 SMC6 25348397 N/A physical interaction ComPPI
IFT88 UBXN10 25348397 N/A physical interaction ComPPI
IFT88 FGF8 25348397 N/A physical interaction ComPPI
IFT88 SLC25A5 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
IFT88 PC 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
IFT88 CCT4 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
IFT88 ITPKB 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
OFD1 IFT88 20230748 27898060 stimulant N/A OmniPath

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