Gene Information gene info

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GENE：SOGA1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SOGA1
FullNmae microtubule crosslinking factor 2
LocusType gene with protein product
Status Approved
HGNC_id HGNC:16111
EnsembleID ENSG00000149639
Uniprot O94964

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SOGA1 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SOGA1 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SOGA1 autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR SOGA1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 SOGA1 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SOGA1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 SOGA1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 SOGA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000096022 SOGA1 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00001A7F58 SOGA1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001A405B SOGA1 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
DYNLL1 SOGA1 25348397 N/A physical interaction ComPPI
LZTS2 SOGA1 25348397 N/A physical interaction ComPPI
PPP2R1A SOGA1 25348397 N/A physical interaction ComPPI
EGLN3 SOGA1 24234451 25348397 26972000 association anti tag coimmunoprecipitation ComPPI,IntAct
NTRK1 SOGA1 25348397 N/A physical interaction ComPPI
HNRNPL SOGA1 25348397 N/A physical interaction ComPPI
MARK4 SOGA1 14676191 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MARK2 SOGA1 25348397 N/A physical interaction ComPPI
RFXANK SOGA1 25348397 N/A physical interaction ComPPI
ANKRA2 SOGA1 25348397 N/A physical interaction ComPPI
TRIM25 SOGA1 25348397 N/A physical interaction ComPPI
RNF41 SOGA1 25348397 N/A physical interaction ComPPI
NOP56 SOGA1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SIRT7 SOGA1 25348397 N/A physical interaction ComPPI
SOGA1 SAMHD1 25348397 N/A physical interaction ComPPI
JPH2 SOGA1 24234451 30021884 physical association cross-linking study IntAct

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