Gene Information gene info

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GENE：IFT20

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol IFT20
FullNmae intraflagellar transport 20
LocusType gene with protein product
Status Approved
HGNC_id HGNC:30989
EnsembleID ENSG00000109083
Uniprot Q8IY31

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
IFT20 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
IFT20 GO:0000139,GO:0001669,GO:0001736,GO:0001750,GO:0001822,GO:0002046,GO:0002177,GO:0005515,GO:0005737,GO:0005794,GO:0005794,GO:0005801,GO:0005813,GO:0005813,GO:0005814,GO:0005902,GO:0005929,GO:0005929,GO:0005929,GO:0005929,GO:0007224,GO:0007283,GO:0008542,GO:0030992,GO:0030992,GO:0030992,GO:0031267,GO:0031514,GO:0032391,GO:0032420,GO:0034067,GO:0035720,GO:0035845,GO:0036064,GO:0036372,GO:0042073,GO:0044292,GO:0045198,GO:0045724,GO:0051642,GO:0055007,GO:0060122,GO:0060271,GO:0060271,GO:0060828,GO:0061351,GO:0061512,GO:0072659,GO:0090102,GO:0097542,GO:0097546,GO:1902017,GO:1902636,GO:2000583,GO:2000785

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
IFT20 KXD1 16189514 23180781 physical association pull down InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 IFT20 20019798 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXA1 IFT20 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
TFAP2C IFT20 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
CEBPA IFT20 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
IFT57 IFT20 25361965 interaction type N/A PTMCode2
IFT20 IFT57 25361965 interaction type N/A PTMCode2
IFT20 TRAF3IP1 25361965 interaction type N/A PTMCode2
TRAF3IP1 IFT20 25361965 interaction type N/A PTMCode2
IFT20 KIF3B 25361965 interaction type N/A PTMCode2
KIF3B IFT20 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
KPNA2 IFT20 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
GOLGA2 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
CORO1A IFT20 25348397 N/A physical interaction ComPPI
WASHC3 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
NDC80 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
NUP62 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
LCA5 IFT20 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KXD1 IFT20 16189514 24234451 25348397 25416956 physical association two hybrid,pull down,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
WASF1 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PSMA1 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PTPN12 IFT20 15231748 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
KIF3B IFT20 12821668 14525934 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
EXOC3 IFT20 25348397 N/A physical interaction ComPPI
TREX1 IFT20 25348397 N/A two hybrid,physical interaction ComPPI
ZDHHC17 IFT20 25348397 N/A physical interaction ComPPI
HTT IFT20 23275563 24234451 25348397 physical association physical interaction,two hybrid prey pooling approach ComPPI,IntAct
ABI2 IFT20 16189514 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT172 IFT20 24234451 25348397 27173435 association,physical association pull down,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
NUP54 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
DTNBP1 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid,inference by socio-affinity scoring ComPPI,IntAct
BLOC1S2 IFT20 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT57 IFT20 12821668 14525934 24234451 25348397 27173435 association,physical association two hybrid,physical interaction,tandem affinity purification,inference by socio-affinity scoring,two hybrid ComPPI,HPRD,IntAct
TRAF3IP1 IFT20 17043677 24234451 25348397 physical association two hybrid,physical interaction,inference by socio-affinity scoring ComPPI,IntAct
HAUS1 IFT20 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 EXOC7 14525934 16189514 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
IFT20 FBF1 25348397 N/A physical interaction ComPPI
IFT20 DISC1 25348397 N/A physical interaction ComPPI
IFT20 BLOC1S6 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
IFT20 KRT13 25348397 N/A physical interaction ComPPI
IFT20 EMILIN1 24234451 25348397 25416956 physical association physical interaction,mammalian protein protein interaction trap,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 IL4I1 25348397 N/A physical interaction ComPPI
IFT20 MED4 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 USHBP1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 FSD2 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 DEUP1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 PCM1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
IFT20 SCLT1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
IFT20 TTC30B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 TTC30A 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 CLUAP1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT80 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT88 17312020 19253336 24234451 25348397 27173435 27898060 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct,OmniPath
IFT20 IFT74 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
IFT20 NME8 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT81 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT46 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT22 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 TTC26 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 IFT52 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT20 ATRIP 14525934 16189514 24234451 25348397 physical association two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
IFT20 CROCCP2 24234451 25348397 25416956 physical association two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
IFT20 IFT27 24234451 25348397 27173435 association anti tag coimmunoprecipitation ComPPI,IntAct
HSPB11 IFT20 24234451 25348397 27173435 association,physical association pull down,physical interaction,inference by socio-affinity scoring ComPPI,IntAct

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