Gene Information gene info

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GENE：PDZD11

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol PDZD11
FullNmae PDZ domain containing 11
LocusType gene with protein product
Status Approved
HGNC_id HGNC:28034
EnsembleID ENSG00000120509
Uniprot Q5EBL8

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
PDZD11 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
PDZD11 GO:0005515,GO:0005576,GO:0005829,GO:0005911,GO:0005912,GO:0007269,GO:0016323,GO:0045199,GO:0045202,GO:0046930,GO:0046931,GO:0098793,GO:1903361

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 PDZD11 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00002C0FCB PDZD11 20371350 21572407 23592263 25416803 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS00000DDD35 PDZD11 20371350 22473208 25416803 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS0000042E1F PDZD11 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00000600E6 PDZD11 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000122F23 PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00002FAA8C PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000031602A PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000251D0B PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00001C11BC PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000315338 PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000024CEE0 PDZD11 21572407 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000298BA3 PDZD11 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00002B3783 PDZD11 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00002075FA PDZD11 22473208 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
PDZD11 ATP2B2 25361965 interaction type N/A PTMCode2
ATP2B2 PDZD11 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
DDIT4L PDZD11 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
EGLN3 PDZD11 24234451 25348397 26972000 association anti tag coimmunoprecipitation ComPPI,IntAct
CBY1 PDZD11 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
DCTN1 PDZD11 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
RAB3IP PDZD11 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
YWHAH PDZD11 17979178 24234451 25348397 association tandem affinity purification ComPPI,IntAct
SFN PDZD11 15778465 24234451 25348397 physical association tandem affinity purification ComPPI,IntAct
YWHAE PDZD11 25348397 N/A physical interaction ComPPI
MDC1 PDZD11 25348397 N/A physical interaction ComPPI
ATP2B2 PDZD11 12763866 14525934 25348397 27898060 N/A two hybrid,experimental interaction detection,in vitro,two hybrid ComPPI,HPRD,OmniPath
PDZD11 SIGMAR1 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
PDZD11 LATS2 25348397 N/A physical interaction ComPPI
PDZD11 PLEKHA5 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PDZD11 TSPAN33 25348397 N/A physical interaction ComPPI
PDZD11 GINM1 25348397 N/A physical interaction ComPPI
PDZD11 SPICE1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
PDZD11 CEP128 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
PDZD11 NINL 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
PDZD11 TMEM17 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
PDZD11 TGM5 25348397 N/A physical interaction ComPPI
PDZD11 ATP7A 16051599 24234451 25348397 27898060 physical association anti tag coimmunoprecipitation,two hybrid,two hybrid array,two hybrid pooling approach ComPPI,IntAct,OmniPath

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