GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
PHF23
FullNmae
PHD finger protein 23
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:28428
EnsembleID
ENSG00000040633
Uniprot
Q9BUL5
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
PHF23
autophagy
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
PHF23
autophagy
36341760
The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns.
regulator signature
Go Annotation:
GeneSymbol
Go id
PHF23
GO:0005515,GO:0005634,GO:0005654,GO:0005737,GO:0006914,GO:0031398,GO:0031398,GO:0046872,GO:1901097,GO:1901097,GO:1902902,GO:1902902
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
ETS1
PHF23
18971253
20019798
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
SMARCA4
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
E2F1
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
EGR1
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOXP1
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOS
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
HNF4A
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
MITF
PHF23
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS000000B1C9
PHF23
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
URS00001A7F58
PHF23
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
URS00005651EE
PHF23
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
URS00001597DC
PHF23
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
ERBB2
PHF23
24234451
25348397
25640309
physical association
two hybrid,physical interaction,two hybrid array
ComPPI,IntAct
SIN3A
PHF23
25348397
N/A
physical interaction
ComPPI
STK11
PHF23
24234451
25348397
25640309
physical association
two hybrid,physical interaction,two hybrid array
ComPPI,IntAct
SAP30
PHF23
25348397
N/A
physical interaction
ComPPI
SIN3B
PHF23
25348397
N/A
physical interaction
ComPPI
SUDS3
PHF23
25348397
N/A
physical interaction
ComPPI
BRMS1L
PHF23
25348397
N/A
physical interaction
ComPPI
EEF1D
PHF23
20195357
24234451
25348397
physical association
display technology
ComPPI,IntAct
PRSS23
PHF23
16169070
24234451
25348397
physical association
two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach
ComPPI,IntAct
PHF23
FOXK2
24234451
25348397
25609649
association
physical interaction,tandem affinity purification
ComPPI,IntAct
Visualization