Gene Information gene info

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GENE：SOGA3

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SOGA3
FullNmae MTCL family member 3
LocusType gene with protein product
Status Approved
HGNC_id HGNC:21494
EnsembleID ENSG00000214338
Uniprot Q5TF21

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SOGA3 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SOGA3 autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR SOGA3 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 SOGA3 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SOGA3 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 SOGA3 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 SOGA3 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
PRDM14 SOGA3 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 SOGA3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SOGA3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SOGA3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 SOGA3 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000239117 SOGA3 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00002B7450 SOGA3 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000003ABC4 SOGA3 21572407 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004AF715 SOGA3 21572407 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000076B539 SOGA3 21572407 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004977C5 SOGA3 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000453664 SOGA3 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000E7139 SOGA3 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000004BACE SOGA3 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000047944F SOGA3 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000003575B SOGA3 23313552 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000045DBD SOGA3 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00003808EC SOGA3 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000017EA6A SOGA3 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS0000272039 SOGA3 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
NRBF2 SOGA3 25348397 N/A physical interaction ComPPI
NTRK1 SOGA3 25348397 N/A physical interaction ComPPI

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