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GENE：VPS26B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol VPS26B
FullNmae VPS26 retromer complex component B
LocusType gene with protein product
Status Approved
HGNC_id HGNC:28119
EnsembleID ENSG00000151502
Uniprot Q4G0F5

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
VPS26B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
VPS26B autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
VPS26B autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
VPS26B GO:0005515,GO:0005768,GO:0005769,GO:0005770,GO:0005829,GO:0006886,GO:0016241,GO:0030904,GO:0030904,GO:0030906,GO:0042147,GO:0042147,GO:0042147,GO:0045335,GO:0071346

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
VPS26B hsa:112936 path:hsa04144 Endocytosis - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 VPS26B 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
GATA2 VPS26B 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
CTCF VPS26B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 VPS26B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS VPS26B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A VPS26B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 VPS26B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000F4AC3 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000013ABA3 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001B341F VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000330617 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000017DBB8 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000939AF VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000001EB3 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000037E170 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000250A40 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075ABF4 VPS26B 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
TTF1 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
COL4A5 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NTRK1 VPS26B 25348397 N/A physical interaction ComPPI
ENO1 VPS26B 25348397 N/A physical interaction ComPPI
SNX1 VPS26B 25348397 N/A physical interaction ComPPI
SNX2 VPS26B 25348397 N/A physical interaction ComPPI
MYCBP2 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NEK1 VPS26B 25348397 N/A physical interaction ComPPI
ETV6 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SUPT5H VPS26B 25348397 N/A physical interaction ComPPI
KIF1B VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
VPS35 VPS26B 14525934 16190980 22939629 24234451 25348397 26186194 26344197 26496610 27898060 association,physical association anti tag coimmunoprecipitation,two hybrid,experimental interaction detection,physical interaction,two hybrid array,in vivo,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct,OmniPath
MYH1 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CAB39 VPS26B 25348397 N/A physical interaction ComPPI
VPS29 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PPIL2 VPS26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
ENTR1 VPS26B 25348397 N/A physical interaction ComPPI
TXNDC11 VPS26B 25348397 N/A physical interaction ComPPI
TBC1D5 VPS26B 20923837 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
VPS26B MOV10 25348397 N/A physical interaction ComPPI
VPS26B NXF1 25348397 N/A physical interaction ComPPI
VPS26B CFAP410 25348397 N/A physical interaction ComPPI
VPS26B SNX27 25348397 N/A physical interaction ComPPI
VPS26B MRM1 25348397 N/A physical interaction ComPPI
VPS26B MRPS30 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
VPS26B CCDC102B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
VPS26B WASHC2A 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct

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