GENE:ATG9A
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | ATG9A |
| FullNmae | autophagy related 9A |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:22408 |
| EnsembleID | ENSG00000198925 |
| Uniprot | Q7Z3C6 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| ATG9A | autophagy | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| ATG9A | GO:0000045,GO:0000045,GO:0000139,GO:0000407,GO:0000407,GO:0000422,GO:0005515,GO:0005739,GO:0005768,GO:0005770,GO:0005776,GO:0005789,GO:0005794,GO:0005802,GO:0016020,GO:0017121,GO:0017128,GO:0031902,GO:0031966,GO:0034045,GO:0034497,GO:0043231,GO:0044805,GO:0055037,GO:0055038,GO:0060349,GO:0097300 |
KEGG Annotation:
| GeneSymbol | GeneID | Pathway | Pathway Name |
|---|---|---|---|
| ATG9A | hsa:79065 | path:hsa04136 | Autophagy - other - Homo sapiens (human) |
| ATG9A | hsa:79065 | path:hsa04137 | Mitophagy - animal - Homo sapiens (human) |
| ATG9A | hsa:79065 | path:hsa04140 | Autophagy - animal - Homo sapiens (human) |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| E2F4 | ATG9A | 17531812 18971253 | trascriptional regulation,stimulation | chromatin immunoprecipitation array,inferred by curator | TFlink |
| HIF1A | ATG9A | 18971253 19828020 | trascriptional regulation,stimulation | chromatin immunoprecipitation array,inferred by curator | TFlink |
| SMARCA4 | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TAL1 | ATG9A | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00000EED18 | ATG9A | 22081425 22743998 | mrna cleavage,inhibition | N/A | miRDeathDB |
| URS0000122ED0 | ATG9A | 19088304 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | array technology,clip | TarBase |
| URS0000324096 | ATG9A | 18668040 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | experimental interaction detection,clip | TarBase |
| URS00001C85C7 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000023F008 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00003D8730 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000032EF64 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS0000237CBD | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000029979D | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000000B1C9 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00000A07C1 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS0000031E12 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000075AAA0 | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000050CCE0 | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00001EFBE3 | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00002CCA6E | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000045147B | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00001ADE63 | ATG9A | 23592263 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00001E0AEA | ATG9A | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000585553 | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000BE495 | ATG9A | 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000057A7C | ATG9A | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002971AB | ATG9A | 20371350 21572407 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075D1FC | ATG9A | 20371350 21572407 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000171CD1 | ATG9A | 20371350 21572407 22473208 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000007D64A | ATG9A | 20371350 21572407 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000F0F49 | ATG9A | 20371350 21572407 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000041CB9C | ATG9A | 20371350 21572407 22473208 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040EE1D | ATG9A | 20371350 21572407 22473208 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075D814 | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075CC78 | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001012BC | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004818BD | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004900F1 | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000008B558 | ATG9A | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000076995 | ATG9A | 25416803 27626694 | mrna cleavage,inhibition | western blot,miRNA interference luciferase reporter assay | TarBase |
| URS0000568FF8 | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00001799A3 | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000364FEF | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00001C0099 | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00005F9738 | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000EBD4B | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000019D79B | ATG9A | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| GOLGA2 | ATG9A | 21169990 24234451 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| LGALS3 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| KRTAP5-9 | ATG9A | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| KRTAP10-8 | ATG9A | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| TFRC | ATG9A | 22613832 24234451 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| KRTAP4-2 | ATG9A | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| VCP | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| KRT31 | ATG9A | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| LGALS9C | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| EGLN3 | ATG9A | 24234451 25348397 26972000 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| CD44 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| REL | ATG9A | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| MAPK14 | ATG9A | 19893488 24234451 25348397 | physical association | anti bait coimmunoprecipitation | ComPPI,IntAct |
| PSMD11 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| YWHAZ | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| RAB7A | ATG9A | 21169990 24234451 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| PTGIR | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| MAPK6 | ATG9A | 21900206 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| AP2A1 | ATG9A | 24234451 24603492 25348397 | colocalization,association | pull down,fluorescence microscopy | ComPPI,IntAct |
| CHRND | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| OCRL | ATG9A | 24234451 25107275 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| LGALS8 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| SLC4A8 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| ATP2B2 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| RGS3 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| GABRD | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| TMBIM6 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| SRCAP | ATG9A | 14525934 16169070 25348397 | N/A | two hybrid,two hybrid | ComPPI,HPRD |
| AP2M1 | ATG9A | 24234451 24603492 25348397 | association | pull down | ComPPI,IntAct |
| TBK1 | ATG9A | 21903422 24234451 25348397 | association,physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| AMFR | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| VPS35 | ATG9A | 24234451 24603492 25348397 | colocalization,physical association | anti tag coimmunoprecipitation,fluorescence microscopy | ComPPI,IntAct |
| TNFRSF10A | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| ULK1 | ATG9A | 22613832 24234451 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| TGOLN2 | ATG9A | 21169990 24234451 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| HTR3A | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| FAF2 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| VPS29 | ATG9A | 24234451 24603492 25348397 | association | anti tag coimmunoprecipitation,pull down | ComPPI,IntAct |
| NPLOC4 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| UFD1 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| MYH9 | ATG9A | 21169990 24234451 25348397 | physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| SUPT20H | ATG9A | 25348397 | N/A | two hybrid,physical interaction | ComPPI |
| HERPUD1 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| TBC1D5 | ATG9A | 24234451 24603492 25348397 | colocalization,association | anti tag coimmunoprecipitation,fluorescence microscopy | ComPPI,IntAct |
| ZFAND2B | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| PSMD6 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | UBE3A | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | LONRF1 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| ATG9A | NOTCH2NLA | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| ATG9A | LGALS9 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | UBXN7 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | SLC17A2 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | TMCO3 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | TPRA1 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | SLC44A5 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | GHDC | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | SLC13A2 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | MARCHF9 | 25348397 | N/A | physical interaction | ComPPI |
| ATG9A | DNM2 | 24234451 24603492 25348397 | colocalization | fluorescence microscopy | ComPPI,IntAct |
| HSCB | ATG9A | 24234451 25348397 28380382 | association | anti bait coimmunoprecipitation | ComPPI,IntAct |
| TP63 | ATG9A | 22356768 27898060 | N/A | N/A | OmniPath |
| SUPT20H | ATG9A | 19893488 27898060 | stimulant | N/A | OmniPath |
| TBK1 | ATG9A | 21903422 27898060 | N/A | N/A | OmniPath |
| PRKAA1 | ATG9A | 25266655 27898060 | N/A | N/A | OmniPath |
